Interface
MolecularGraph.Graph.addnode! — Methodaddnode!(graph) -> Int
addnode!(graph, attr) -> IntAdd new node and return the node index. If the node attribute type is required, specify the node attribute object by node keyword.
MolecularGraph.Graph.clearcache! — Methodclearcache!(graph::AbstractGraph) -> nothingClear calculated property caches.
Calling clearcache! is recommended when the graph nodes/edges are added, removed or reindexed. You can Graph.clone the graph before destructive operation instead.
MolecularGraph.Graph.clone — Functionclone(graph::AbstractGraph) -> AbstractGraphReturn deep copy of the graph.
MolecularGraph.Graph.edgeattr — Methodedgeattr(graph::AbstractGraph, u::Int, v::Int
) -> Union{AbstractEdge,Nothing}Return the attribute object of an edge that connects u and v. If not found, return nothing.
MolecularGraph.Graph.edgeattr — Methodedgeattr(graph::AbstractGraph, i::Int) -> AbstractEdgeReturn the attribute object of edge i.
MolecularGraph.Graph.edgeattrs — Methodedgeattrs(graph::Union{OrderedGraph,OrderedDiGraph}) -> Vector{AbstractEdge}Return graph edge attributes.
MolecularGraph.Graph.edgeattrtype — Methodedgeattrtype(graph) -> TypeReturn edge attribute type.
MolecularGraph.Graph.edgecount — Methodedgecount(graph::AbstractGraph) -> IntReturn the number of graph edges.
MolecularGraph.Graph.edgeset — Methodedgeset(graph::Union{OrderedGraph,OrderedDiGraph}) -> Set{Int}Return the set of edge keys.
MolecularGraph.Graph.getedge — Methodgetedge(graph::AbstractGraph, i::Int) -> Tuple{Int,Int}
getedge(graph::HyperGraph, i::Int) -> Set{Int}Return an edge.
MolecularGraph.Graph.hasedge — Methodhasedge(graph::UndirectedGraph, u::Int, v::Int) -> Bool
hasedge(graph::DirectedGraph, source::Int, target::Int) -> BoolReturn whether the given two nodes are connected by at least one edge.
MolecularGraph.Graph.indegree — Methodindegree(graph::DirectedGraph, n::Int) -> IntReturn the number of inneighbors of the node 'n'.
MolecularGraph.Graph.inneighbors — Methodinneighbors(graph::DirectedGraph, i::Int) -> Dict{Int,Int}Return the mapping of predecessor node keys and in edge keys connected to the given node.
MolecularGraph.Graph.neighborcount — Methodneighborcount(graph::AbstractGraph, n::Int) -> Int
degree(graph::AbstractGraph, n::Int) -> IntReturn the number of adjacent nodes of the node 'n'.
MolecularGraph.Graph.neighbors — Methodneighbors(graph, i) -> Dict{Int,Int}Return the mapping of incident edges and adjacent nodes of node i. If the graph is directed graph, both outneighbors and inneighbors are mapped.
MolecularGraph.Graph.nodeattr — Methodnodeattr(graph::AbstractGraph, i::Int) -> AbstractNodeReturn the attribute object of node i.
MolecularGraph.Graph.nodeattrs — Methodnodeattrs(graph::Union{OrderedGraph,OrderedDiGraph}) -> Vector{AbstractNode}Return graph node attributes.
MolecularGraph.Graph.nodeattrtype — Methodnodeattrtype(graph) -> TypeReturn node attribute type.
MolecularGraph.Graph.nodecount — Methodnodecount(graph::AbstractGraph) -> IntReturn the number of graph nodes.
MolecularGraph.Graph.nodeset — Methodnodeset(graph::Union{OrderedGraph,OrderedDiGraph}) -> Set{Int}Return the set of node keys.
MolecularGraph.Graph.outdegree — Methodoutdegree(graph::DirectedGraph, n::Int) -> IntReturn the number of outneighbors of the node 'n'.
MolecularGraph.Graph.outneighbors — Methodoutneighbors(graph::DirectedGraph, i::Int) -> Dict{Int,Int}Return the mapping of successor node keys and out edge keys connected to the given node.
MolecularGraph.Graph.setedgeattr! — Methodsetedgeattr!(graph::AbstractGraph, i::Int, attr::AbstractNode)Update the edge attribute.
MolecularGraph.Graph.setnodeattr! — Methodsetnodeattr!(graph::AbstractGraph, i::Int, attr::AbstractNode)Update the node attribute.
MolecularGraph.Graph.unlinkedges — Functionunlinkedges(graph, edges)Delete given edges from the graph.
MolecularGraph.Graph.unlinknodes — Functionunlinknodes(graph, nodes)Delete given nodes and its incident edges from the graph.